Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015905085.1_cds_XP_016455232.1_49179
CDS Infomation

[gene=LOC107779344] [db_xref=GeneID:107779344] [protein=origin of replication complex subunit 3-like isoform X3] [protein_id=XP_016455232.1] [location=join(4908..4964,5067..5249,5374..5554,5902..6071,6177..6307,7291..7564,7708..7785,8263..8354,8450..8543,9232..9431,9831..9900,12393..12478,13917..13994,18140..18239)] [gbkey=CDS]
Sequence

ATGGATTCACCAAATACTGATCCTCTCACAGACCCATTTGCAGAAAACAATCTTCAGCCA
TACTTCGTGCTGCACAAATCATCAAAGTCTTCAGAATCTACTGCAAAATCTCCTGGAAAA
CCCCGGAAGAGAAAACTTGATTCTTCCCCCAAAGTATCATCAAGCAATGAAAATACCAGT
GATGACTTGAAAATGGAAGCTTTCTACTGTGTGTGGTCAAAAATTGAATCCAAGATCAAG
GATGTTTTGACGAGTATAAATGCTGATGTGTTTGATGAAATCGGACAATGGGTTTGTGAA
TCTTTTGATGAGATTTGTTCATGTAAAGGGCCCGTTGATCCATCAACTTCAAGCCTTCCA
TACCCTTTTGTTAATAATGGCGGTATAGTTAAAAAGCTCTTCACTGGTCTGGTTTTTACC
AAGAATATCGAAACAGTCGATGACATATTAACTTTTGCTGACCTTGGTTCAAACTTGAAA
TCTCGTGGATACCATGTCGCTAATATTTCCTCCTTGGATTTTTCTACCAAGAATGGCATT
GGGGGTTGTCTAAGAGGGTTGCTGAGACAATTGCTTATGGTTGATGTAGAAGCAGCTGAA
ATGTCCCTTCTAGCATCATGGTATAACGGCCACGGGAAGTATGAGAACCCCGTGGTAGTG
ATTATTGAGGATTTGGAGAGGTGCTCTGGGACTCTCTTATCAGATTTCATCAATATGTTG
AGTGAATGGGCTGTTAAGATTCCAATCATCTTAATAGCGGGTGTTGCAACAAGTGTTGAT
GCTCCCAGAAATTTGCTCAGTTCACGTGCACTTCAACATTTGTCTACATCGATATTCACC
TTGAAATCACCTGCTGAAAGGATGGATGCCATTATTGAGGCTGTTCTGGTAAAAGATTGT
GCTGGCTTTAGTGTTGGCCACAAGGTGGCGACTCTATTGAGGAACTATTTTTTAAAACAA
GAAGGAACAGTCACTTCATTTGTTAGAGCCTTAAAGATGGCAATAGTCCAACAACTTTCC
ATTGAGCCTCTTAGCTTCATGCTCAAGTTTTCAGTTGATGACGGAGATAATAAGAGGTCG
TGCAGTGAGGAACTTGCTAAATTGCCAGAGGCATTGGTTAAGCATGCTTTCGATCTTCCA
TCGTACAGGACTTTTTCAGTACAACGCAGGAATAATCATGTAGAACCAAATGTTATGACT
CTAGCCCATGGATTATCGGAACTGCAGAGAGTGCAGAAAGTATGGAGATCTCTCCTTATG
TGCTTGCATGAAGCTGGAAGATATCATAGAGTTGCACTGATGGACTTGTATTGGGAGGCA
TTGGATCCTGGCTTGTACAACTCCAGGTCATCTGATAATAACCTTGAGAGTGCAAAATGC
ATGAGCTTGTTGTCAAATAATCATCATCATTTCAGACAGCAAAAGGCTGATTTTACAAAT
CAGGTCATCCGCAAAATGAGGGACTTACCAGCTGCAAAGTTATCTCAGTTGCTTAAGAGT
TGGGAGAGGCTCACTGATGGGACAACGGAGGTTCATGAGAAGATTAAGGAACTGCAGTTT
CAAGTGGTATCAGAGGATGACAAAAGTCGCAGAGCAGAATTAACAGATATATCGAAGAGG
CATATTAATCGACGTAGTCTACATGCATGCACATCAAGTGAAAAAGCTATGACTTTGGCA
ACTAACTTGATAAGGCTTTGGTTGGTGATCCCAGAAGAAGAGTTCAAGTTGATCTCTTGG
ATTTCCACAAAATTCTCAAGTGTGGATGCTGCAGCAAGAGTGTGGGTACACTAG

Peptide Sequence

PEP ID

XP_016455232.1
PEP Infomation

PREDICTED: origin of replication complex subunit 3-like isoform X3 [Nicotiana tabacum]
Sequence

MDSPNTDPLTDPFAENNLQPYFVLHKSSKSSESTAKSPGKPRKRKLDSSPKVSSSNENTS
DDLKMEAFYCVWSKIESKIKDVLTSINADVFDEIGQWVCESFDEICSCKGPVDPSTSSLP
YPFVNNGGIVKKLFTGLVFTKNIETVDDILTFADLGSNLKSRGYHVANISSLDFSTKNGI
GGCLRGLLRQLLMVDVEAAEMSLLASWYNGHGKYENPVVVIIEDLERCSGTLLSDFINML
SEWAVKIPIILIAGVATSVDAPRNLLSSRALQHLSTSIFTLKSPAERMDAIIEAVLVKDC
AGFSVGHKVATLLRNYFLKQEGTVTSFVRALKMAIVQQLSIEPLSFMLKFSVDDGDNKRS
CSEELAKLPEALVKHAFDLPSYRTFSVQRRNNHVEPNVMTLAHGLSELQRVQKVWRSLLM
CLHEAGRYHRVALMDLYWEALDPGLYNSRSSDNNLESAKCMSLLSNNHHHFRQQKADFTN
QVIRKMRDLPAAKLSQLLKSWERLTDGTTEVHEKIKELQFQVVSEDDKSRRAELTDISKR
HINRRSLHACTSSEKAMTLATNLIRLWLVIPEEEFKLISWISTKFSSVDAAARVWVH

Transcript Sequence

Gene sequence data has not been registered.